CDS

Accession Number TCMCG017C12416
gbkey CDS
Protein Id OMO97905.1
Location join(7247..7352,8814..8926,9025..9308,9423..10076,10172..10196)
GeneID InterPro:IPR000504
Organism Corchorus olitorius
locus_tag COLO4_14256

Protein

Length 393aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01015403.1
Definition hypothetical protein COLO4_14256 [Corchorus olitorius]
Locus_tag COLO4_14256

EGGNOG-MAPPER Annotation

COG_category A
Description serine arginine-rich splicing factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12893        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010445        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031053        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGGCCCATTTTTTGTGGAAACTTTGAGTATGACGCGCGTCAGTCTGATTTGGAACGACTCTTCAGAAAGTATGGGAGAGTTGAAAGAGTGGATATGAAGTCTGGGTTTGCTTTCATCTATATGGAAGATGAGAGAGATGCTGAAGATGCCATCCGAGCACTTGATCGGACAGAATTTGGTCGAAAAGGACGAAGGCTTCGTGTTGAATGGACAAAACATGAGCGTGGTATTAGAAGGCCTGGAGGTAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGTGGTTCAAGAAGATCTTCAACAAATTCAAGACCTTCGAAGACCTTATTTGTCATCAATTTCGATCCATATAGTACTCGGACAAGGGATCTGGAAAGGCACTTTGAGTCATATGGAAAGATAGTGAGTGTAAGGATCAGAAGAAATTTTGCATTTGTACAATATGATTCACAAGATGATGCTACCAGAGCGTTGGAAGCTACAAATATGAGCAAACTGATGGATAGAGTTATTTCAGTGGAGTATGCAGTTCGAGATGATGATGATCGTAGAAATGGGTATAGCCCTGAGAGAGGTCGTGAAAGGTCACCTGAGAGAGGTCGTGACAGAAGGCGATCTCCAAGTCCTTACCGAAGAGAGAGGGGAAGCCCTGATTATGGCCGTGGTTCTAGTCGTAGTCCTTATAATAGGAAGGAGAGGGCAAGCCCTGATTATGGCCGTGGCCGTAGTCCAAGTCCCTATAAGAGAGGAGATAGAGCAAGCCCTGAATATGCCAGGGCCACTAGCCGTAGCCGTAGCCGTAGCCCTCACCGAAGAGACAGGGCTGGTACTGACCATGCTCGTGGCTCCAGCAGAAGTCCTTACAGGAAAGACAAGGTAAGCCCTGAGAATGGACGAGGTCCCAGCCGTAGTCCTTATAGGAGAGAAAAGCGTAGTGCTGAGAATGATCGTAGCCCCAGTCACAGTCCCTATAAAAGAGAAAGGCCCAGCTCTGACAATGGTCGTGGACCTAGCCATAGTCCATATGGAAGGGACAGAGCCAGCCCCGAGAATGGCCGTGGTACCAGCCCAGGTTCTGTCCCTGAAGGAAGGGACAGTCCATATGGTGGTGGAGCTGAAAGCCCCGTCAATGAGAGATATCGCAGTCAATCACCAGCTGGGGAGGAATGA
Protein:  
MRPIFCGNFEYDARQSDLERLFRKYGRVERVDMKSGFAFIYMEDERDAEDAIRALDRTEFGRKGRRLRVEWTKHERGIRRPGGSGGGGGGGGGGGGGGGSRRSSTNSRPSKTLFVINFDPYSTRTRDLERHFESYGKIVSVRIRRNFAFVQYDSQDDATRALEATNMSKLMDRVISVEYAVRDDDDRRNGYSPERGRERSPERGRDRRRSPSPYRRERGSPDYGRGSSRSPYNRKERASPDYGRGRSPSPYKRGDRASPEYARATSRSRSRSPHRRDRAGTDHARGSSRSPYRKDKVSPENGRGPSRSPYRREKRSAENDRSPSHSPYKRERPSSDNGRGPSHSPYGRDRASPENGRGTSPGSVPEGRDSPYGGGAESPVNERYRSQSPAGEE